FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1282952
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCTCA4150.002912869712.1749229
AACCGCG7300.00202025688.8988918
ACGCTCT11100.0014166097.17028861
CGCTCTT11450.00201387846.9356652
CTTCCGA14100.00260145756.1436886
GCTCTTC16553.7342162E-46.1068053
CTCAAAG13350.0097681785.9618131
TTAAATT16700.00274927265.61988972
CTCCTTC22054.4151733E-45.25022941
TTCCGAT20800.00118786355.2054847
CTCTTCC21450.00178549615.04813584
Produced by FastQC (version 0.11.5)