FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1001323
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAGACC1950.00704110618.4968817
CTCAGTT3800.001481616213.32047751
CCTTGAT14657.483582E-56.91028261
GAGCCCC2450.00389522876.514377115-119
CAGATTT16353.2164864E-46.1775583
Produced by FastQC (version 0.11.5)