FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008697

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008697
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences786744
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGATAT8200.0010146728.335143
TTCGCAG7800.0060129477.88582479
CTGAAAT9806.5203954E-47.7114331
CTTCGAT9200.00299508527.4675931
ATTCTGG10200.008588386.70037366
TCCGTTT11650.00428582876.45347363
Produced by FastQC (version 0.11.5)