FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008703

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008703
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1497638
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTTGT9753.4948654E-48.1740091
CCTACAA12400.0044792316.42714451
CTCCAAA15801.9582981E-46.41974831
CCCGGAT18904.7361245E-56.13345581
CCAAAAC15000.0049823645.79611541
CAATGAT20601.6443347E-45.6272971
CTGGAAT16850.00293147215.58972641
GTTATAT17400.00428510745.4130391
GTCAAAG18050.00659210565.218111
CTAAAAA19450.00277243975.21501451
CAGCAAT20250.0045816885.00898931
Produced by FastQC (version 0.11.5)