FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008710

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008710
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2231823
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCTAGA2550.003632400420.740904145
ATCTAAG5850.00456171679.4885976
CCCAGAG9052.464668E-48.44341851
CTTAAAC9755.495009E-47.83722451
CTCCACT10801.934099E-47.7184781
CTTAATT15606.459504E-77.57004641
CTCTTAT18853.0699084E-87.37043051
TAGAACT9900.00556473347.0089373
CCCTGAT19253.4481127E-76.85641431
CCCCTGT10200.00735052686.8104221
CTCAGAA13403.086329E-46.73926831
TAATAGA15700.0081523396.7374916145
CTCCTAT12750.00129250046.53800541
CTCAAGG19202.4034707E-66.5124661
ATTAGAA12850.00141186016.4871261
GTATAAC12050.00515597366.34132241
CTTAAAG19051.4767193E-56.19909331
GTTTAAA13450.00236029466.1977371
CGCAATT12550.0078641856.08868031
ATCGAAT16104.301977E-46.04054831
Produced by FastQC (version 0.11.5)