FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008719

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008719
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2162441
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTGGGT7903.9023845E-49.1760621
CCCGACT8004.4256044E-49.0613611
CCTCGAA13001.2604806E-47.24908921
CTCCGAT15800.0013534635.96444031
CTCGCCC16050.0016333015.87153631
CTTAAAT22951.3164613E-45.36969571
CTCATCC21650.00191248165.0224641
CTTTGAA36104.565627E-75.0201451
Produced by FastQC (version 0.11.5)