FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008720

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008720
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1143996
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTGAATA7700.00352530068.36836052
TAAACAT9800.00372619797.3031573
GGTTGAT11150.00162642087.0772081
CTTCAGT11350.00196254166.9524991
GTTTCAA13450.00164167896.40034061
CAATTTC15750.00152038575.9061514
CAACAAA18800.0020481835.34212831
Produced by FastQC (version 0.11.5)