FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008737

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008737
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences506385
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAGTGG2900.004589791414.5508698
ATTTAGA3100.007137092813.6134486
TGGAAAT9302.8620654E-48.3242632
GGAAATG9600.00357843337.33175133
AATATTT15000.00683982625.6307853
TTTTTTT15350.0088199845.5023953
Produced by FastQC (version 0.11.5)