FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008743

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008743
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences521075
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTCCCCG4356.142033E-515.830654145
CATGATT6200.00545057939.2833271
CTGGAAT6600.009105118.7207011
GATATTC10100.0049903997.0857495
CAAAAGA10850.0094827066.6309481
CAAAGAA13600.00179496166.34815741
Produced by FastQC (version 0.11.5)