FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1882063
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTTACC12250.0039718826.50174431
CTCAAAT16252.8414495E-46.23803761
CTCCAAG13000.00737242456.12664371
CCTCCAC19507.5294156E-55.9409881
CTGGAAT19901.00978614E-45.8215711
CTTTGCT22358.986307E-55.50737571
CAAACAT17100.0035174835.5045341
CATAAAT25601.2501034E-45.0910321
Produced by FastQC (version 0.11.5)