FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9816156
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTTAAC17208.1178485E-56.34546571
CTCAAAT86300.05.98615841
CTTAAAT95400.05.72023061
CCCACGA46605.2750693E-115.3087671
CTCAATT61850.05.29387241
CTCAAAA133500.05.2867791
CTTAAAA136450.05.27912951
CTCACAT41702.5120244E-95.23462871
CTCAAAC74300.05.0923141
Produced by FastQC (version 0.11.5)