FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008777

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008777
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2876510
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGGAC10900.0093822696.64050961
CCCAAAT25605.858692E-75.9375491
AAGATCT17558.051796E-45.7519393
CTATTGG18250.0012603735.5525581
CTCAAAT23201.5854122E-45.3038211
TAACAGT18200.00772094455.14845289
Produced by FastQC (version 0.11.5)