FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008784

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008784
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences964829
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCATAT10558.447993E-47.52709441
AATCCAG10650.00802476056.7479995
CTGAAAT16907.067839E-56.4075461
CTTCCAA15309.647457E-46.13393351
AATATTG17900.006566685.2193325
GTTTTAT18000.00664794075.2138441
Produced by FastQC (version 0.11.5)