FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008793

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008793
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences914289
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCAAGCT6550.0081486448.8410161
TTGAACT8250.0062194787.8564673
GATTTAA10550.00718094976.825945
CTTTGTT12100.003496716.58052871
TTTCTCT17100.00204983126.2746067145
CAAGAAA15450.00697272365.6221991
Produced by FastQC (version 0.11.5)