FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1138097
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCATGT4600.0062983610.9799173
GTCAGAT9750.0031299367.4346841
CTCCGCT10200.00485981777.10668371
ACAATGC12355.8353465E-47.010893
CAATGAT14750.00410769975.89734271
GGCTGAT14900.0045969955.8379731
CAAAAAG27101.6322938E-65.6171641
CAAAAAT25954.5320176E-65.58675671
AATCTTC18600.0098198235.04256065
Produced by FastQC (version 0.11.5)