FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences478513
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCAGG1500.001507804324.1260781
CCACTCA1750.00389708720.4871778
CAAACGA2800.003001768615.5096211
AACGATT4958.6109043E-411.5911282
CCCGAAA5900.00344427589.8139971
Produced by FastQC (version 0.11.5)