FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008808

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008808
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences513202
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTTAAA3250.00745906513.5229351
CCCTTGA4850.00833220910.5720541
CTCCGCA6050.00384037279.6858491
CATCAAG8456.538424E-59.5354031
CAAAGAT7850.00340770028.3980011
CTCGCCG10250.00459361177.1462661
ATTTTCC11250.0017332497.03297956
Produced by FastQC (version 0.11.5)