FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1975791
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GACTCAA7450.00253440048.6798346
GGGGGGG2003.4631445E-48.182053135-139
CTCCAGA18754.4277524E-56.1622111
CTCGAAG17701.3335496E-46.119781
CTCAGAA15650.00126378665.9985581
GTTTCGG19050.0022279885.30702261
Produced by FastQC (version 0.11.5)