Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005008827 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1041115 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 47 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGGTT | 430 | 0.0038299728 | 11.737274 | 1 |
CCATCAC | 1060 | 0.007431782 | 6.8019238 | 1 |
ATATAAG | 1180 | 0.0031275325 | 6.6511707 | 6 |
GTTTATT | 1280 | 0.0065518436 | 6.196128 | 1 |
CCTTGAT | 1460 | 0.003890434 | 5.92606 | 1 |
TAGGTAC | 310 | 0.00850029 | 5.52331 | 10-14 |