FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008841

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008841
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1673172
Sequences flagged as poor quality0
Sequence length100-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCAT14057.33482E-78.1180571
CTTACGA8550.00938670157.5038621
CCCGCGA9650.0033341397.38722131
AATATTG21201.2464661E-66.36465265
ATTCAAT15450.0012642345.9982331
GTTGAAG19606.344118E-45.4556141
AATTTTG19807.651058E-45.38000975
GTCAGAA17400.0051865895.3260171
CGCACAG19850.00458621755.0086945
Produced by FastQC (version 0.11.5)