FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008846

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008846
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1339163
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAAGAA12901.21824654E-47.26855131
CATAGGC10250.005455687.02279237
CTTCAAT16856.878462E-56.4207471
CTTCACC16754.4090278E-46.02847431
CTTCCGT15950.00160837585.878641
GAACATC18702.945855E-45.77408744
CGATGGA15000.00523613635.7701111
GTTTCAG15300.0065198165.65697151
CTCAAAA16900.00320153335.5481841
CTTTAAA19555.2327773E-45.53399371
CTCCGCC20107.5977924E-45.3825661
CAAGGAT17650.005342165.3124251
ACAAATA18450.00918025155.07201674
CTTTTAT24353.4318498E-45.03551771
Produced by FastQC (version 0.11.5)