FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008855

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008855
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences683230
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT2952.2647648E-417.0599929
ACACGTC2650.002175162316.2782658
CACACGT2700.002464276315.9768177
GAGCACA3650.001141360313.7882124
AGCACAC4100.002737484212.2748725
GTTCGAT5902.8521576E-411.0130791
CTCAAAA9350.00215680137.72158771
CTTTGAT12200.00391341846.5095521
Produced by FastQC (version 0.11.5)