FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008864

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008864
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences462908
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACACGT1750.00398698620.4064877
ACACGTC1900.00641447818.7954488
AAGACTA2700.00257539815.8699985
CCACCGT4350.004342286411.5394331
CAAACGG5600.002413459810.244191
CTCCGCC6709.78097E-49.6325961
GATATAA6600.0096704038.6563635
Produced by FastQC (version 0.11.5)