FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008881

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008881
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1183266
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAGCT5601.7307646E-411.623491
CTCTTGG5350.001540341610.81479551
CCCACGA7853.7443664E-49.2132411
TGCGCAA12851.347889E-57.8663325
AACATCC11756.58191E-47.705245145
CTTAAAA17306.437927E-45.8528041
CTTCCAG18250.00765016865.15184261
Produced by FastQC (version 0.11.5)