FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences440416
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGCTAT1700.003455687820.9162129
CCCCCCC652.7222422E-416.656342135-139
GAGGATT3850.002825197815.648922145
GTTTCAT6104.295399E-410.5342551
CAAAAAG11252.2452332E-47.61587571
AAAAAGG11950.00365267326.5513682
Produced by FastQC (version 0.11.5)