FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008890

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008890
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences675502
Sequences flagged as poor quality0
Sequence length100-151
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAGG4450.00443660211.5074941
CTCAAAG6300.0054242839.2894961
CTTTGAT10054.354438E-48.0069911
AATGCAG8300.00634867147.837885
CTTATAT9750.00285803647.50305561
CTTAAAA15400.0059790045.70037271
CTTTTAT27305.3208067E-55.09135871
Produced by FastQC (version 0.11.5)