FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences787241
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTTCTA4654.996017E-412.3687955
ATACATC8450.0078250067.65730866
CAAATTT12300.00443199146.43278033
CAAAATT15007.793089E-46.24307541
CTAATTG2750.00779410036.094199140-144
Produced by FastQC (version 0.11.5)