FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008893

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008893
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1037924
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCCAGG7750.00342924948.3938456
GTTGGAT8050.00465443548.1142571
CTTCGAT10004.5000738E-47.98352671
AATTTTG17852.886074E-66.883845
GTTTTAA12150.00355243246.5708041
GTTTATT13100.0077798856.09429551
CTTCAAA17909.5043547E-45.67645361
CCGCAGG19300.00245945135.26469041
GAAATTT18550.0092975435.06620033
Produced by FastQC (version 0.11.5)