FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008894

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008894
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences768445
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCATTT6850.00121219999.4109176
GTGAAAG10400.00621854336.9278351
AAAAGTC10350.00628256.9205354
GTTTTAT15050.00548911565.7448091
CAAAAAA22606.619362E-45.10084871
Produced by FastQC (version 0.11.5)