FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008895

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008895
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences949193
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT3204.3085232E-415.6805419
CTCAAAT7750.00351350068.37116051
ACTACAA8500.0084716187.5899097
GCGCGTA1850.0090412397.5360107140-144
CACAAAG11850.00293487966.69143441
CTTCCAT18250.0079462415.13482141
Produced by FastQC (version 0.11.5)