FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1543549
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACAAAC10100.0065905696.88737731
CCCGCAG16851.5995989E-56.60534141
ATCATGT14105.782377E-46.4000598
CCCTGAT14750.0064916935.6593231
ATATAAC14750.00661386555.6497856
CAAAAAC27256.512364E-75.61605551
CTTCAAC17550.00126883545.54914571
CAAAGAT26702.7385795E-65.46198843
CGAATAC16550.0039146115.45473965
GGTATAT16650.004118545.43130731
GTTCAAA17550.00763857555.1527781
Produced by FastQC (version 0.11.5)