FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008899

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008899
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences739326
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTTCCAA6354.8754613E-511.2713121
CTTTAAC5400.00181436710.6033821
CCAACAT5600.002454922510.224691
CTCCGGA7600.00313893298.475731
CCGCAAT8300.0069372237.7609091
TCCAAAA10700.0090712786.6623572
CAAAGAA17150.0041629775.4253461
Produced by FastQC (version 0.11.5)