FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008904

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008904
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences790116
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGAGATT9900.00523448837.05200242
GAGATTT10350.0080509456.74539383
CAAGAAT12700.0079912046.07811071
AGATTTT16100.00264850935.63686474
TTTAATT16250.00295428475.5851862
GCACTCC3850.00387914185.07712110-14
Produced by FastQC (version 0.11.5)