FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences485941
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCCAGG2000.00869411717.8302781
CCTACGA2650.002378896616.0601068
CAAAAGT7250.00211106248.8536541
AACATTT7850.0045237618.1382092
GGAAGAA16100.0020477945.7588471
Produced by FastQC (version 0.11.5)