FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008914

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008914
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences997891
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTGGG3150.007449588713.5273731
CTCCCAG5200.001414038610.9259551
CTCATGG7250.00219834928.8161161
CTTTGGT10000.00489066267.1018711
CAACTAT10550.0082156386.73163131
CTTTTAA13050.0093593755.98625141
CAACAAT16705.170219E-45.9536641
Produced by FastQC (version 0.11.5)