FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008915

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008915
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences468399
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTAAAT2850.003077363815.4516861
GAGCTGT5200.001265578211.0697856
CCATTCT6000.00352607749.7860681
CTTTGAA6859.682708E-49.6432051
CCCCCCC2004.603748E-47.96764105-109
TAAATAT15400.00716718855.6067753
Produced by FastQC (version 0.11.5)