Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005008916 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2063204 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 44 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CTCGCGC | 660 | 0.0092128385 | 8.7104 | 1 |
CAGGTTA | 1250 | 0.0054452103 | 6.3081145 | 5 |
CCTTCGT | 1280 | 0.0067899837 | 6.175537 | 1 |
CTTTCAT | 3950 | 3.6379788E-12 | 6.00356 | 1 |
ATTTTAG | 2130 | 5.053554E-5 | 5.7206335 | 6 |
CTTAAAT | 2305 | 2.6768765E-5 | 5.6116886 | 1 |
CTTTTCG | 2590 | 5.119653E-6 | 5.549096 | 1 |
CTTTAAT | 3150 | 1.7494858E-7 | 5.4751086 | 1 |