FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences806327
Sequences flagged as poor quality0
Sequence length100-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTTGAG7957.183414E-59.4554641
CGAATTT9153.5078995E-48.1700623
AGTCACC4206.312643E-46.354356140-144
CCAGTCA4701.4046747E-46.0969367135-139
CACCAGT7001.1941122E-55.5722814140-144
Produced by FastQC (version 0.11.5)