FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008918

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008918
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3152344
Sequences flagged as poor quality0
Sequence length100-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGAAT19906.179958E-45.46673251
CCCGAGG21302.617431E-45.44791171
ACAATCC24858.831196E-55.20530223
TCGACCC18350.0088981955.08620267
GTTAAAA23057.9964945E-45.0342961
Produced by FastQC (version 0.11.5)