FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008923

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008923
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences772216
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCATCCA9804.3903045E-58.7637094
GTTGGAA9252.150725E-48.5487011
AAGCTTC8458.654435E-48.4698565
TCCAATT7750.00374674638.3113887
TCGATTT8850.00136817198.0870383
TTGGACC2100.00319886427.419104140-144
CTTCAAA14708.4431726E-56.8463621
GATATTG14800.00490872935.8029965
ATGATAT16950.00362694435.48916673
Produced by FastQC (version 0.11.5)