FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1070732
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGGCGC3050.006344326313.8597397
CGAGATT6400.00840149458.8083544
CAAAACT10550.00108022487.3554991
GTTCAAT10750.00131864967.21865221
GTTCATT10800.00138515717.18523171
GTTCAAA12206.563623E-46.9389431
CTACAAT10300.0069515666.84911871
ATTCAGG12050.004440836.4320566
GTATATT15200.00117696326.0335321
CAAATAT19858.7580574E-45.32544763
CATAAAT17900.0081575785.12344651
Produced by FastQC (version 0.11.5)