FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences629707
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACCAGT4550.005887569411.0786519
CTCCGAT5550.002079540210.4305191
CTTTTGT11201.8302795E-47.75304131
GGGGGGG1700.0078045747.6609745105-109
CAATGAT9550.00259521447.57714371
TTAATAT10250.0054258897.02548653
GTTTTAT12550.00513209786.3424621
CTCTTTT14950.00485516675.8082991
Produced by FastQC (version 0.11.5)