FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008936

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008936
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences812854
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTAAAGG2800.003137373415.4089931
CTCCGTT8600.0091404217.52532151
CCCCCCC2400.00218610726.8827453130-134
CATTGAT12150.0039112786.51024631
ATCAAAA18700.00185618965.3835341
ATTTTCC19650.0036756825.0977356
Produced by FastQC (version 0.11.5)