FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008943

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008943
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences435224
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCACT1600.002291961822.4496921
CCCATAA3250.0084794513.2625881
CTCGGCA4700.007620820310.6994281
CTTTGAA6850.00117778729.4387031
Produced by FastQC (version 0.11.5)