FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008950

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008950
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences525802
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT3855.086331E-616.9013181
CTCTATT4500.005261255411.2466781
CTCCTGA4850.00917886510.4350621
TTTATCC8951.428908E-48.8759037
CTCTTTT13954.687181E-67.77420141
CTTTCAT11502.5064274E-47.54435631
Produced by FastQC (version 0.11.5)