FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1373317
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTGT4150.002898041912.1833141
GTTACAT8100.00514056678.02551651
CTGGTCG13650.0052255767.0536823145
CTCCGAT12000.00328183176.6210511
TGGAATA20750.00118015175.20811134
Produced by FastQC (version 0.11.5)