FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008958

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008958
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4559942
Sequences flagged as poor quality0
Sequence length100-151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGAGTAG12950.00104445666.66253763
GGTCTAC18253.044883E-56.32290171
CCCGTAG19551.2363387E-56.27135661
GTGAGTA16102.6555976E-46.27135661
CCCACCT15550.00118951316.0293751
GAGTAGG13150.0089439336.01371344
CTCGGAT14700.0041933065.8873961
ATCGCAT24105.144161E-55.3866011
TAGGAGG18000.0070150095.1910617
CCTCGAT21400.00175673955.05518251
Produced by FastQC (version 0.11.5)