FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences601166
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCAGTG3000.005664053414.0975624
TTCGAGG5501.8591405E-411.5324528
GTGTAAA4750.00940882710.4006561
CTTAAAA7550.00335505078.4130191
CAAAGAA14106.21263E-57.00753361
CTTTCCG12000.00417251236.46945521
Produced by FastQC (version 0.11.5)