FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008974

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008974
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences563889
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCTAAA1750.00366730420.7040061
TCTACTG2900.003807868814.9659643
ATTTTCG6450.0072169338.9718446
TTCAAGA9450.00234808567.6545492
CAAAAGC10900.0092528146.64807461
Produced by FastQC (version 0.11.5)