FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005008978

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005008978
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1379951
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGCGA8300.00770248667.67164661
CTTGTAT12800.00109723296.63277771
CTTTGCT15602.2588363E-46.3493251
GCCTGTT16153.533942E-46.13309431
GTTCAAT14350.00396485535.9163451
CCTTTAT19409.757948E-55.83502051
GTTTGTT16900.0040206635.44227931
GTTTCTT27503.3431552E-65.40269851
TGAACAG20900.00178432075.048474
Produced by FastQC (version 0.11.5)